Adding logic to the toolbox of molecular biology

Giovanni Boniolo, Marcello D’Agostino, Mario Piazza, Gabriele Pulcini

Research output: Contribution to journalArticle

Abstract

The aim of this paper is to argue that logic can play an important role in the “toolbox” of molecular biology. We show how biochemical pathways, i.e., transitions from a molecular aggregate to another molecular aggregate, can be viewed as deductive processes. In particular, our logical approach to molecular biology — developed in the form of a natural deduction system — is centered on the notion of Curry-Howard isomorphism, a cornerstone in nineteenth-century proof-theory.

Original languageEnglish
Pages (from-to)399-417
Number of pages19
JournalEuropean Journal for Philosophy of Science
Volume5
Issue number3
DOIs
Publication statusPublished - Oct 4 2015

Keywords

  • Biochemical pathways
  • Curry-Howard isomorphism
  • Natural deduction
  • State transitions
  • Substructural logics
  • Zsyntax

ASJC Scopus subject areas

  • History and Philosophy of Science

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