Clonal expansion of mtDNA deletions

different disease models assessed by digital droplet PCR in single muscle cells

Selena Trifunov, Angela Pyle, Maria Lucia Valentino, Rocco Liguori, Patrick Yu-Wai-Man, Florence Burté, Jennifer Duff, Stephanie Kleinle, Isabel Diebold, Michela Rugolo, Rita Horvath, Valerio Carelli

Research output: Contribution to journalArticle

1 Citation (Scopus)

Abstract

Deletions in mitochondrial DNA (mtDNA) are an important cause of human disease and their accumulation has been implicated in the ageing process. As mtDNA is a high copy number genome, the coexistence of deleted and wild-type mtDNA molecules within a single cell defines heteroplasmy. When deleted mtDNA molecules, driven by intracellular clonal expansion, reach a sufficiently high level, a biochemical defect emerges, contributing to the appearance and progression of clinical pathology. Consequently, it is relevant to determine the heteroplasmy levels within individual cells to understand the mechanism of clonal expansion. Heteroplasmy is reflected in a mosaic distribution of cytochrome c oxidase (COX)-deficient muscle fibers. We applied droplet digital PCR (ddPCR) to single muscle fibers collected by laser-capture microdissection (LCM) from muscle biopsies of patients with different paradigms of mitochondrial disease, characterized by the accumulation of single or multiple mtDNA deletions. By combining these two sensitive approaches, ddPCR and LCM, we document different models of clonal expansion in patients with single and multiple mtDNA deletions, implicating different mechanisms and time points for the development of COX deficiency in these molecularly distinct mitochondrial cytopathies.

Original languageEnglish
Article number11682
JournalScientific Reports
Volume8
Issue number1
DOIs
Publication statusPublished - Dec 1 2018

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Mitochondrial DNA
Muscle Cells
Polymerase Chain Reaction
Laser Capture Microdissection
Muscles
Mitochondrial Diseases
Clinical Pathology
Electron Transport Complex IV
Oxidoreductases
Genome
Biopsy

ASJC Scopus subject areas

  • General

Cite this

Clonal expansion of mtDNA deletions : different disease models assessed by digital droplet PCR in single muscle cells. / Trifunov, Selena; Pyle, Angela; Valentino, Maria Lucia; Liguori, Rocco; Yu-Wai-Man, Patrick; Burté, Florence; Duff, Jennifer; Kleinle, Stephanie; Diebold, Isabel; Rugolo, Michela; Horvath, Rita; Carelli, Valerio.

In: Scientific Reports, Vol. 8, No. 1, 11682, 01.12.2018.

Research output: Contribution to journalArticle

Trifunov, Selena ; Pyle, Angela ; Valentino, Maria Lucia ; Liguori, Rocco ; Yu-Wai-Man, Patrick ; Burté, Florence ; Duff, Jennifer ; Kleinle, Stephanie ; Diebold, Isabel ; Rugolo, Michela ; Horvath, Rita ; Carelli, Valerio. / Clonal expansion of mtDNA deletions : different disease models assessed by digital droplet PCR in single muscle cells. In: Scientific Reports. 2018 ; Vol. 8, No. 1.
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