Genotype-phenotype relationships in trichothiodystrophy patients with novel splicing mutations in the XPD gene

Elena Botta, Tiziana Nardo, Donata Orioli, Roberta Guglielmino, Roberta Ricotti, Sergio Bondanza, Francesco Benedicenti, Giovanna Zambruno, Miria Stefanini

Research output: Contribution to journalArticle

15 Citations (Scopus)

Abstract

Trichothiodystrophy (TTD) is a rare, autosomal recessive neurodevelopmental disorder most commonly caused by mutations in ERCC2 (XPD), a gene that encodes a subunit of the transcription/repair factor IIH (TFIIH). Here, we describe two TTD cases in which detailed biochemical and molecular investigations offered a clue to explain their moderately affected phenotype. Patient TTD22PV showed new mutated XPD alleles: one contains a nonsense mutation (c.1984C>T) encoding a nonfunctional truncated product (p.Gln662X) whereas the second carries a genomic deletion (c.2191-18-c.2213del) that affects the splicing of intron 22 and generates multiple out-of-frame transcripts from codon 731. XPD mRNA from the second allele corresponds to 20% of the total. The predicted proteins, which are longer than normal, affect the cellular repair activity but only partially interfere with TFIIH stability, suggesting that the observed changes in the C-ter region of XPD cause minor structural changes that do not drastically compromise the transcriptional activity of TFIIH. Patient TTD24PV was compound heterozygous for a typical TTD allele (c.2164C>T, p.Arg722Trp) and for a new XPD allele with a mutation that partially affects intron 10 splicing, resulting in both mutated and normal XPD transcripts (that together represent 15% of the total XPD mRNA). Compared to the previously described TTD compound heterozygotes for the Arg722Trp change, Patient TTD24PV's cells show similar level of TFIIH but increased repair activity, suggesting that even low amounts of normal XPD subunits are able to partially rescue the functionality of TFIIH complexes.

Original languageEnglish
Pages (from-to)438-445
Number of pages8
JournalHuman Mutation
Volume30
Issue number3
DOIs
Publication statusPublished - Mar 2009

Fingerprint

Transcription Factor TFIIH
Trichothiodystrophy Syndromes
Genotype
Phenotype
Mutation
Alleles
Genes
Introns
Messenger RNA
Nonsense Codon
Heterozygote
Codon

Keywords

  • DNA repair
  • TFIIH
  • Transcription
  • Trichothiodystrophy
  • TTD
  • XPD

ASJC Scopus subject areas

  • Genetics
  • Genetics(clinical)

Cite this

Botta, E., Nardo, T., Orioli, D., Guglielmino, R., Ricotti, R., Bondanza, S., ... Stefanini, M. (2009). Genotype-phenotype relationships in trichothiodystrophy patients with novel splicing mutations in the XPD gene. Human Mutation, 30(3), 438-445. https://doi.org/10.1002/humu.20912

Genotype-phenotype relationships in trichothiodystrophy patients with novel splicing mutations in the XPD gene. / Botta, Elena; Nardo, Tiziana; Orioli, Donata; Guglielmino, Roberta; Ricotti, Roberta; Bondanza, Sergio; Benedicenti, Francesco; Zambruno, Giovanna; Stefanini, Miria.

In: Human Mutation, Vol. 30, No. 3, 03.2009, p. 438-445.

Research output: Contribution to journalArticle

Botta, E, Nardo, T, Orioli, D, Guglielmino, R, Ricotti, R, Bondanza, S, Benedicenti, F, Zambruno, G & Stefanini, M 2009, 'Genotype-phenotype relationships in trichothiodystrophy patients with novel splicing mutations in the XPD gene', Human Mutation, vol. 30, no. 3, pp. 438-445. https://doi.org/10.1002/humu.20912
Botta, Elena ; Nardo, Tiziana ; Orioli, Donata ; Guglielmino, Roberta ; Ricotti, Roberta ; Bondanza, Sergio ; Benedicenti, Francesco ; Zambruno, Giovanna ; Stefanini, Miria. / Genotype-phenotype relationships in trichothiodystrophy patients with novel splicing mutations in the XPD gene. In: Human Mutation. 2009 ; Vol. 30, No. 3. pp. 438-445.
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