Linkage in human heterochromatin between highly divergent Sau3A repeats and a new family of repeated DNA sequences (HaeIII family)

A. Agresti, R. Meneveri, A. G. Siccardi, A. Marozzi, G. Corneo, S. Gaudi, E. Ginelli

Research output: Contribution to journalArticle

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Abstract

The hybridization of human DNA with three non-cross-hybridizing monomers (68 bp in length) of the heterochromatic Sau3A family of DNA repeats, indicates the coexistence within a Sau3A-positive genomic block of divergent Sau3A units as well as of unrelated sequences. To gain some insight into the structure of these human heterochromatic DNA regions, three previously cloned Sau3A-positive genomic fragments (with a total length of approximately 1900 base-pairs (bp)) were sequenced. The analysis of the sequences showed the presence of clustered Sau3A units with different degrees of divergence and of two DNA regions of approximately 100 bp and 291 bp in length, unrelated to the family of repeats. A consensus sequence derived from the 24 identified Sau3A monomers presents, among highly variable regions, two less variant regions of 8 bp and 10 bp in length, respectively. The Sau3A-unrelated DNA fragment 291 bp in length, used as a probe on genomic DNA digested with a series of restriction enzymes, defines a "new" family of DNA repeats possessing periodicities for HaeIII (HaeIII family). Sau3A and HaeIII repeats display a high degree of linkage in a collection of Sau3A-positive genomic recombinant phages.

Original languageEnglish
Pages (from-to)625-631
Number of pages7
JournalJournal of Molecular Biology
Volume205
Issue number4
DOIs
Publication statusPublished - Feb 20 1989

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Heterochromatin
Base Pairing
DNA
Consensus Sequence
Periodicity
Bacteriophages
Sequence Analysis
Enzymes

ASJC Scopus subject areas

  • Virology

Cite this

Linkage in human heterochromatin between highly divergent Sau3A repeats and a new family of repeated DNA sequences (HaeIII family). / Agresti, A.; Meneveri, R.; Siccardi, A. G.; Marozzi, A.; Corneo, G.; Gaudi, S.; Ginelli, E.

In: Journal of Molecular Biology, Vol. 205, No. 4, 20.02.1989, p. 625-631.

Research output: Contribution to journalArticle

Agresti, A. ; Meneveri, R. ; Siccardi, A. G. ; Marozzi, A. ; Corneo, G. ; Gaudi, S. ; Ginelli, E. / Linkage in human heterochromatin between highly divergent Sau3A repeats and a new family of repeated DNA sequences (HaeIII family). In: Journal of Molecular Biology. 1989 ; Vol. 205, No. 4. pp. 625-631.
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