Natural selection at the brush-border: Adaptations to carbohydrate diets in humans and other mammals

Chiara Pontremoli, Alessandra Mozzi, Diego Forni, Rachele Cagliani, Uberto Pozzoli, Giorgia Menozzi, Jacopo Vertemara, Nereo Bresolin, Mario Clerici, Manuela Sironi

Research output: Contribution to journalArticlepeer-review

Abstract

Dietary shifts can drive molecular evolution in mammals and a major transition in human history, the agricultural revolution, favored carbohydrate consumption. We investigated the evolutionary history of nine genes encoding brush-border proteins involved in carbohydrate digestion/absorption. Results indicated widespread adaptive evolution in mammals, with several branches experiencing episodic selection, particularly strong in bats. Many positively selected sites map to functional protein regions (e.g., within glucosidase catalytic crevices), with parallel evolution at SI (sucrase-isomaltase) and MGAM (maltase-glucoamylase). In human populations, five genes were targeted by positive selection acting on noncoding variants within regulatory elements. Analysis of ancient DNA samples indicated that most derived alleles were already present in the Paleolithic. Positively selected variants at SLC2A5 (fructose transporter) were an exception and possibly spread following the domestication of specific fruit crops. We conclude that agriculture determined no major selective event at carbohydrate metabolism genes in humans, with implications for susceptibility to metabolic disorders.

Original languageEnglish
Pages (from-to)2569-2584
Number of pages16
JournalGenome Biology and Evolution
Volume7
Issue number9
DOIs
Publication statusPublished - Sep 1 2015

Keywords

  • LCT
  • MGAM
  • Natural selection
  • SI
  • SLC2A2
  • TREH

ASJC Scopus subject areas

  • Ecology, Evolution, Behavior and Systematics
  • Genetics

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