New graphic representation of structural parameters of proteins

F. Facchiano; A. Facchiano; A. Facchiano; R. Ragone; G. Colonna

New graphic representation of structural parameters of proteins

F. Facchiano, A. Facchiano, A. Facchiano, R. Ragone, G. Colonna

Istituto Dermopatico dell'Immacolata , IDI

Research output: Contribution to journal › Article › peer-review

Abstract

A computer program is described that is designed to make the visual inspection of classical plots of protein properties (e. g. hydrophobicity, volume, etc. ) as a function of sequence easier. An algorithm written in BASIC language has been used in order to generate a pseudo-tridimensional representation of the desired protein property. The data utilized by the program are arithmetic averages of the selected parameter obtained by using a five-residue window as a shuttle along the given amino acid sequence.

Original language	English
Pages (from-to)	303-305
Number of pages	3
Journal	Computer Applications in the Biosciences
Volume	4
Issue number	2
Publication status	Published - Apr 1988

ASJC Scopus subject areas

Medicine (miscellaneous)
Molecular Biology
Statistics and Probability
Computational Mathematics
Computer Science Applications
Computational Theory and Mathematics
Biochemistry

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