TargetFinder: Searching annotated sequence databases for target genes of transcription factors

Giovanni Lavorgna; Alessandro Guffanti; Giuseppe Borsani; Andrea Ballabio; Edoardo Boncinelli

doi:10.1093/bioinformatics/15.2.172

TargetFinder: Searching annotated sequence databases for target genes of transcription factors

Giovanni Lavorgna, Alessandro Guffanti, Giuseppe Borsani, Andrea Ballabio, Edoardo Boncinelli

IRCCS Ospedale San Raffaele

Research output: Contribution to journal › Article › peer-review

Abstract

Summary: TargetFinder is a new software tool to search a database of annotated sequences for transcription factor binding sites located in context with other important transcription regulatory signals and regions, like the TATA element, the promoter, and so on, thereby greatly reducing the background usually associated with this kind of search. Availability: The TargetFinder Web service is available at http://hercules.tigem.it/TargetFinder.html.

Original language	English
Pages (from-to)	172-173
Number of pages	2
Journal	Bioinformatics
Volume	15
Issue number	2
DOIs	https://doi.org/10.1093/bioinformatics/15.2.172
Publication status	Published - Feb 1999

ASJC Scopus subject areas

Clinical Biochemistry
Computer Science Applications
Computational Theory and Mathematics

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abstract = "Summary: TargetFinder is a new software tool to search a database of annotated sequences for transcription factor binding sites located in context with other important transcription regulatory signals and regions, like the TATA element, the promoter, and so on, thereby greatly reducing the background usually associated with this kind of search. Availability: The TargetFinder Web service is available at http://hercules.tigem.it/TargetFinder.html.",

author = "Giovanni Lavorgna and Alessandro Guffanti and Giuseppe Borsani and Andrea Ballabio and Edoardo Boncinelli",

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