The facebase consortium: A comprehensive resource for craniofacial researchers

James F. Brinkley, Shannon Fisher, Matthew P. Harris, Greg Holmes, Joan E. Hooper, Ethylin Wang Jabs, Kenneth L. Jones, Carl Kesselman, Ophir D. Klein, Richard L. Maas, Mary L. Marazita, Licia Selleri, Richard A. Spritz, Harm van Bakel, Axel Visel, Trevor J. Williams, Joanna Wysocka, Yang Chai, Robert Aho, Fowzan AlkurayaIros Barozzi, Kyle Chard, Timothy C. Cox, Michael L. Cunningham, Landon T. Detwiler, Michael J. Donovan, Eleanor Feingold, David Fitzpatrick, Jeremy Green, Alexandre Grimaldi, Irina Grishina, Benedikt Hallgrimsson, Matthew Harris, Thach Vu Ho, Harry Hochheiser, Elizabeth J. Leslie, Hong Li, Eric Liao, Jose L V Mejino, Washington Mio, Catherine B. Nowak, Carolina Parada, Peter J. Park, Len Pennacchio, S. Steven Potter, Edward Rubin, Seth Ruffins, Bridget D. Samuels, Pedro A. Sanchez-Lara, Robert Schuler, FaceBase Consortium

Research output: Contribution to journalArticle

Abstract

The FaceBase Consortium, funded by the National Institute of Dental and Craniofacial Research, National Institutes of Health, is designed to accelerate understanding of craniofacial developmental biology by generating comprehensive data resources to empower the research community, exploring high-throughput technology, fostering new scientific collaborations among researchers and human/computer interactions, facilitating hypothesis-driven research and translating science into improved health care to benefit patients. The resources generated by the FaceBase projects include a number of dynamic imaging modalities, genome-wide association studies, software tools for analyzing human facial abnormalities, detailed phenotyping, anatomical and molecular atlases, global and specific gene expression patterns, and transcriptional profiling over the course of embryonic and postnatal development in animal models and humans. The integrated data visualization tools, faceted search infrastructure, and curation provided by the FaceBase Hub offer flexible and intuitive ways to interact with these multidisciplinary data. In parallel, the datasets also offer unique opportunities for new collaborations and training for researchers coming into the field of craniofacial studies. Here,we highlight the focus of each spoke project and the integration of datasets contributed by the spokes to facilitate craniofacial research.

Original languageEnglish
Pages (from-to)2677-2688
Number of pages12
JournalDevelopment (Cambridge)
Volume143
Issue number14
DOIs
Publication statusPublished - Jul 15 2016

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Keywords

  • Craniofacial development
  • Data resource
  • FaceBase consortium

ASJC Scopus subject areas

  • Molecular Biology
  • Developmental Biology

Cite this

Brinkley, J. F., Fisher, S., Harris, M. P., Holmes, G., Hooper, J. E., Jabs, E. W., Jones, K. L., Kesselman, C., Klein, O. D., Maas, R. L., Marazita, M. L., Selleri, L., Spritz, R. A., van Bakel, H., Visel, A., Williams, T. J., Wysocka, J., Chai, Y., Aho, R., ... FaceBase Consortium (2016). The facebase consortium: A comprehensive resource for craniofacial researchers. Development (Cambridge), 143(14), 2677-2688. https://doi.org/10.1242/dev.135434