Use of the minimum spanning tree model for molecular epidemiological investigation of a nosocomial outbreak of hepatitis C virus infection

Enea Spada, Luciano Sagliocca, John Sourdis, Anna Rosa Garbuglia, Vincenzo Poggi, Carmela De Fusco, Alfonso Mele

Research output: Contribution to journalArticle

27 Citations (Scopus)

Abstract

The minimum spanning tree (MST) model was applied to identify the history of transmission of hepatitis C virus (HCV) infection in an outbreak involving five children attending a pediatric oncology-hematology outpatient ward between 1992 and 2000. We collected blood samples from all children attending since 1992, all household contacts, and one health care worker positive for antibody to HCV (anti-HCV). HCV RNA detection was performed with these samples and with smears of routinely collected bone marrow samples. For all isolates, we performed sequence analysis and phylogenetic tree analysis of hypervariable region 1 of the E2 gene. The MST model was applied to clinical-epidemiological and molecular data. No additional cases were detected. All children, bat not the health care worker, showed genotype 3a. On six occasions, all but one child had shared the medication room with another patient who later seroconverted. HCV RNA detection in bone marrow smears revealed, in some cases, a delay of several months in anti-HCV responses. Sequence analysis and phylogenetic tree analysis revealed a high identity among the isolates. The MST model applied to molecular data, together with the clinical-epidemiological data, allowed us to identify the source of the outbreak and the most probable patient-to-patient chain of transmission. The management of central venous catheters was suspected to be the probable route of transmission. In conclusion, the MST model, supported by an exhaustive clinkal-epidemiological investigation, appears to be a useful tool in tracing the history of transmission in outbreaks of HCV infection.

Original languageEnglish
Pages (from-to)4230-4236
Number of pages7
JournalJournal of Clinical Microbiology
Volume42
Issue number9
DOIs
Publication statusPublished - Sep 2004

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Molecular Models
Virus Diseases
Hepacivirus
Disease Outbreaks
Hepatitis C Antibodies
Sequence Analysis
Bone Marrow
History
RNA
Delivery of Health Care
Central Venous Catheters
Hematology
Outpatients
Genotype
Pediatrics
Genes

ASJC Scopus subject areas

  • Microbiology (medical)
  • Microbiology

Cite this

Use of the minimum spanning tree model for molecular epidemiological investigation of a nosocomial outbreak of hepatitis C virus infection. / Spada, Enea; Sagliocca, Luciano; Sourdis, John; Garbuglia, Anna Rosa; Poggi, Vincenzo; De Fusco, Carmela; Mele, Alfonso.

In: Journal of Clinical Microbiology, Vol. 42, No. 9, 09.2004, p. 4230-4236.

Research output: Contribution to journalArticle

Spada, Enea ; Sagliocca, Luciano ; Sourdis, John ; Garbuglia, Anna Rosa ; Poggi, Vincenzo ; De Fusco, Carmela ; Mele, Alfonso. / Use of the minimum spanning tree model for molecular epidemiological investigation of a nosocomial outbreak of hepatitis C virus infection. In: Journal of Clinical Microbiology. 2004 ; Vol. 42, No. 9. pp. 4230-4236.
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