Visualization of human karyopherin beta-1/importin beta-1 interactions with protein partners in mitotic cells by co-immunoprecipitation and proximity ligation assays

Laura Di Francesco, Annalisa Verrico, Italia Anna Asteriti, Paola Rovella, Pietro Cirigliano, Giulia Guarguaglini, Maria Eugenia Schininà, Patrizia Lavia

Research output: Contribution to journalArticle

Abstract

Karyopherin beta-1/Importin beta-1 is a conserved nuclear transport receptor, acting in protein nuclear import in interphase and as a global regulator of mitosis. These pleiotropic functions reflect its ability to interact with, and regulate, different pathways during the cell cycle, operating as a major effector of the GTPase RAN. Importin beta-1 is overexpressed in cancers characterized by high genetic instability, an observation that highlights the importance of identifying its partners in mitosis. Here we present the first comprehensive profile of importin beta-1 interactors from human mitotic cells. By combining co-immunoprecipitation and proteome-wide mass spectrometry analysis of synchronized cell extracts, we identified expected (e.g., RAN and SUMO pathway factors) and novel mitotic interactors of importin beta-1, many with RNA-binding ability, that had not been previously associated with importin beta-1. These data complement interactomic studies of interphase transport pathways. We further developed automated proximity ligation assay (PLA) protocols to validate selected interactors. We succeeded in obtaining spatial and temporal resolution of genuine importin beta-1 interactions, which were visualized and localized in situ in intact mitotic cells. Further developments of PLA protocols will be helpful to dissect importin beta-1-orchestrated pathways during mitosis.

Original languageEnglish
Pages (from-to)1850
Number of pages15
JournalScientific Reports
Volume8
Issue number1
DOIs
Publication statusPublished - Jan 30 2018
Externally publishedYes

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beta Karyopherins
Immunoprecipitation
Ligation
Proteins
Mitosis
Cell Nucleus Active Transport
Interphase
GTP Phosphohydrolases
Proteome
Cytoplasmic and Nuclear Receptors
Cell Extracts
Mass Spectrometry
Cell Cycle
Observation
RNA

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Visualization of human karyopherin beta-1/importin beta-1 interactions with protein partners in mitotic cells by co-immunoprecipitation and proximity ligation assays. / Di Francesco, Laura; Verrico, Annalisa; Asteriti, Italia Anna; Rovella, Paola; Cirigliano, Pietro; Guarguaglini, Giulia; Schininà, Maria Eugenia; Lavia, Patrizia.

In: Scientific Reports, Vol. 8, No. 1, 30.01.2018, p. 1850.

Research output: Contribution to journalArticle

Di Francesco, Laura ; Verrico, Annalisa ; Asteriti, Italia Anna ; Rovella, Paola ; Cirigliano, Pietro ; Guarguaglini, Giulia ; Schininà, Maria Eugenia ; Lavia, Patrizia. / Visualization of human karyopherin beta-1/importin beta-1 interactions with protein partners in mitotic cells by co-immunoprecipitation and proximity ligation assays. In: Scientific Reports. 2018 ; Vol. 8, No. 1. pp. 1850.
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